Beyond the Identification of Transcribed Sequences:
Functional and Expression Analysis
11th Annual Workshop
November 9-12, 2001
Washington D.C.


Abstracts * Speakers * Organizers * Original Announcement

Abstracts

Bruce Aronow: Universal Reference Approach to the Creation and Mining of a General Purpose Mouse Gene Expression Database

Arman A. Bashirova: Comparative analysis of the CD209 (DC-SIGN)-related genes in primates

Giorgio Bernardi: Misunderstandings about isochores: A review

Juergen Bode: Fragile Sites, Bordering Elements and Chromatin Domains: Lessons from the Type 1 Human Interferon Gene Cluster on 9p22

Alvis Brazma: From Microarray Data to Gene Expression Networks

John G. Conboy: Tissue-specific regulation of alternative splicing in protein 4.1R pre-mRNA

Marc Damelin: Genome-wide localization of a chromatin-remodeling factor demonstrates its role in orchestrating the transcriptional program of the TOR signaling pathway

Robert B. Darnell: Identifying RNA-protein interactions important in neuronal function

Olof Emanuelsson: Elucidating a "theoretical" proteome of the Arabidopsis thaliana thylakoid

Tom Freeman: HGMP-RC Microarray Programme - Facing the Challenge of High Throughput Microarray Fabrication and Analysis

Elena I. Frolova: Functional analysis of the promoter for the long isoform of collagen a1(IX) in ovo

Katheleen Gardiner: Never-ending annotation of human chromosome 21: alternative splicing, antisense transcripts and mouse conservation

Mark Gerstein: Integrative Genomics

Yoram Groner: Spatial and temporal expression pattern of Runx3 (aml2) and Runx1 (aml1) indicates non-redundant functions during mouse embryogenesis

S. Blair Hedges: Human and ape molecular clocks and the origin of bipedalism

John Hesketh: mRNA targeting by sequences in the 3’untranslated region promotes nuclear protein import

Geoff Hicks: Functional Analysis of Genetic Determinants of Human Disease

Winston Hide: Diversity in gene expression: Assessment of exon skipping and expression states

Bernhard Korn: Characterization of novel Proteins by Analysis of Human Protein Networks: Part1 - cloning of human full ORFs of novel proteins

Bernhard Korn: Experimental verification of predicted splice variants of human genes

Anuj Kumar, Mike Snyder: Functional Genomics by Transposon-Tagging and ChIP-Chip Analysis in Yeast

Urban I. Liebel: Development of a Microscope-based High Content Screening Platform

Shuo Lin: PRODUCTION OF FERTILE TRANSGENIC ZEBRAFISH FROM LONG-TERM CULTURED CELLS BY NUCLEAR TRANSFER

C Louvet: Real-time quantitative PCR : A fast and efficient method to screen clones derived from Subtractive Suppression Hybridization

Christian Maercker: Gene expression profiling analysis shows differential expression of extracellular matrix genes in left ventricular hypertrophy of renal failure

Stephen Munroe: Alternative processing of thyroid hormone receptor mRNA: Role of cis-acting sequences and antisense RNA

Richard Mural: WHOLE GENOME SHOTGUN ASSEMBLY OF THE MOUSE GENOME

Axel Nagel: GABI Primary Database: Bioinformatics Resource for Plant Genome Data

Laszlo Nagy: Using quantitative and global expression profiling to explore and quantitate nuclear hormone receptor function in myeloid cell differentiation and metabolism

Helen Parkinson: ArrayExpress - a public repository for Gene Expression Data at the European Bioinformatics Institute

Rainer Pepperkok: Systematic subcellular localisation and functional characterization of novel proteins identified by large-scale cDNA sequencing

Graziano Pesole: STRUCTURAL AND COMPOSITIONAL ANALYSIS OF TRANSCRIPTION START SITES AND 5’-UNTRANSLATED REGIONS IN HUMAN MRNAS

K.A. Resing: Proteomics Analysis of Melanoma Cell Lines

Martin Ringwald: The Mouse Gene Expression Database (GXD)

Yikang S. Rong: A generally applicable gene targeting method in Drosophila melanogaster

Serge Saxonov: Annotating Proteomes using Highly Specific Protein Scoring Matrices

Sabrina Semprini: An improved method for cloning EST-specific full-length cDNAs

Jeremy C. Simpson: ‘Green Genes’ - Systematic subcellular localisation of novel proteins identified by large-scale sequencing identifies new regulators of membrane transport

Dobromir Slavov: Phylogenetic comparison of the RNA editase ADAR2 genes reveals conservation and diversity in editing site sequence and alternative splicing patterns

Richard D. Smith: New Methods for the Characterization of Proteomes: Initial Application to D. radiodurans

Marcelo Bento Soares: Strategies for construction of subtracted libraries enriched for full-length cDNAs and for preferential cloning of rare mRNAs

Stefan Stamm: The alternative exon database (AEDB)

Eugene Sverdlov: A technique for genome-wide identification of differences in the interspersed repeats integrations between closely related genomes

Attila Szanto: Interaction between PPAR-gamma and Retinoic Acid Receptor (RAR) pathways during the differentiation of monocytic leukemia cells

Annabel E. Todd: No title

P. Van Sloun: Functional Analysis of the Mammalian Genome by Large Scale Gene Trap Mutagenesis

Andreas Wagner: Robustness and Redundancy in Large Genetic Networks

Sherman M. Weissman: Analysis of myeloid cell development at the RNA and protein level

Ruth Wellenreuther: Generating and Sequencing Full-length cDNAs of Novel Human Genes within the German cDNA Consortium

Thomas Werner: Elucidation of Gene Function Must Include the Genomic Context

Stefan Wieman: IDENTIFICATION OF TRANSCRIBED SEQUENCES: MORE CHALLENGES?

Miles Wilkinson: An RNA Surveillance Mechanism that Detects Aberrant Transcripts

Andreas Winterpacht: Dissection of a complex phenotype by gene identification, gene function analysis and comparative sequencing between man and mouse

Michael Q. Zhang: CART CLASSIFICATION OF HUMAN 5'UTR SEQUENCES

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